[Bug 24292] New: Upgrade failed, from 19.05 to 19.11 on Ubuntu 19.10: Can't load Unaccent.so
https://bugs.koha-community.org/bugzilla3/show_bug.cgi?id=24292 Bug ID: 24292 Summary: Upgrade failed, from 19.05 to 19.11 on Ubuntu 19.10: Can't load Unaccent.so Change sponsored?: --- Product: Koha Version: 19.11 Hardware: All OS: All Status: NEW Severity: enhancement Priority: P5 - low Component: Installation and upgrade (command-line installer) Assignee: koha-bugs@lists.koha-community.org Reporter: mjnkml@gmail.com QA Contact: testopia@bugs.koha-community.org Upgrading koha using apt update from (presumably) 19.05 to 19.11 failed: $ sudo apt upgrade Reading package lists... Done Building dependency tree Reading state information... Done Calculating upgrade... Done 0 to upgrade, 0 to newly install, 0 to remove and 0 not to upgrade. 1 not fully installed or removed. After this operation, 0 B of additional disk space will be used. Do you want to continue? [Y/n] y Setting up koha-common (19.11.00-1) ... Upgrading database schema for instance Can't load '/usr/lib/x86_64-linux-gnu/perl5/5.28/auto/Text/Unaccent/Unaccent.so' for module Text::Unaccent: /usr/lib/x86_64-linux-gnu/perl5/5.28/auto/Text/Unaccent/Unaccent.so: undefined symbol: unac_debug_callback at /usr/lib/x86_64-linux-gnu/perl/5.28/DynaLoader.pm line 187. at /usr/share/koha/lib/Koha/Patron.pm line 26. Compilation failed in require at /usr/share/koha/lib/Koha/Patron.pm line 26. BEGIN failed--compilation aborted at /usr/share/koha/lib/Koha/Patron.pm line 26. Compilation failed in require at /usr/share/koha/lib/Koha/Patrons.pm line 30. BEGIN failed--compilation aborted at /usr/share/koha/lib/Koha/Patrons.pm line 30. Compilation failed in require at /usr/share/koha/lib/Koha/Checkouts/ReturnClaim.pm line 27. BEGIN failed--compilation aborted at /usr/share/koha/lib/Koha/Checkouts/ReturnClaim.pm line 27. Compilation failed in require at /usr/share/koha/lib/Koha/Checkouts/ReturnClaims.pm line 26. BEGIN failed--compilation aborted at /usr/share/koha/lib/Koha/Checkouts/ReturnClaims.pm line 26. Compilation failed in require at /usr/share/koha/lib/Koha/Checkout.pm line 27. BEGIN failed--compilation aborted at /usr/share/koha/lib/Koha/Checkout.pm line 27. Compilation failed in require at /usr/share/koha/lib/Koha/Checkouts.pm line 25. BEGIN failed--compilation aborted at /usr/share/koha/lib/Koha/Checkouts.pm line 25. Compilation failed in require at /usr/share/koha/lib/C4/Auth.pm line 37. BEGIN failed--compilation aborted at /usr/share/koha/lib/C4/Auth.pm line 37. Compilation failed in require at /usr/share/koha/lib/C4/Output.pm line 34. BEGIN failed--compilation aborted at /usr/share/koha/lib/C4/Output.pm line 34. Compilation failed in require at /usr/share/koha/lib/Koha/Plugins.pm line 29. BEGIN failed--compilation aborted at /usr/share/koha/lib/Koha/Plugins.pm line 29. Compilation failed in require at /usr/share/koha/intranet/cgi-bin/installer/data/mysql/updatedatabase.pl line 18792. dpkg: error processing package koha-common (--configure): installed koha-common package post-installation script subprocess returned error exit status 2 Errors were encountered while processing: koha-common E: Sub-process /usr/bin/dpkg returned an error code (1) $ The only way I could get it to move forward was to comment out the use Unaccent on line 26, and also comment out the part that actually uses the function.
lsb_release -a No LSB modules are available. Distributor ID: Ubuntu Description: Ubuntu 19.10 Release: 19.10 Codename: eoan uname -a Linux koha 5.3.0-23-generic #25-Ubuntu SMP Tue Nov 12 09:22:33 UTC 2019 x86_64 x86_64 x86_64 GNU/Linux
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https://bugs.koha-community.org/bugzilla3/show_bug.cgi?id=24292 mjnkml@gmail.com changed: What |Removed |Added ---------------------------------------------------------------------------- OS|All |Linux Hardware|All |PC Priority|P5 - low |P4 CC| |mjnkml@gmail.com Severity|enhancement |minor -- You are receiving this mail because: You are watching all bug changes. You are the assignee for the bug.
https://bugs.koha-community.org/bugzilla3/show_bug.cgi?id=24292 --- Comment #1 from mjnkml@gmail.com --- In Koha's About -> Perl moduls page, Text::Unaccent is shown Installed at version 1.08. -- You are receiving this mail because: You are watching all bug changes. You are the assignee for the bug.
https://bugs.koha-community.org/bugzilla3/show_bug.cgi?id=24292 Marcel de Rooy <m.de.rooy@rijksmuseum.nl> changed: What |Removed |Added ---------------------------------------------------------------------------- CC| |m.de.rooy@rijksmuseum.nl --- Comment #2 from Marcel de Rooy <m.de.rooy@rijksmuseum.nl> --- https://rt.cpan.org/Public/Dist/Display.html?Name=Text-Unaccent -- You are receiving this mail because: You are watching all bug changes. You are the assignee for the bug.
https://bugs.koha-community.org/bugzilla3/show_bug.cgi?id=24292 Katrin Fischer <katrin.fischer@bsz-bw.de> changed: What |Removed |Added ---------------------------------------------------------------------------- See Also| |https://bugs.koha-community | |.org/bugzilla3/show_bug.cgi | |?id=14759 CC| |katrin.fischer@bsz-bw.de, | |martin.renvoize@ptfs-europe | |.com --- Comment #3 from Katrin Fischer <katrin.fischer@bsz-bw.de> --- Could the last comment on bug 14759 be related to this? Also linking them with see also. -- You are receiving this mail because: You are the assignee for the bug. You are watching all bug changes.
https://bugs.koha-community.org/bugzilla3/show_bug.cgi?id=24292 Mason James <mtj@kohaaloha.com> changed: What |Removed |Added ---------------------------------------------------------------------------- CC| |mtj@kohaaloha.com -- You are receiving this mail because: You are watching all bug changes.
https://bugs.koha-community.org/bugzilla3/show_bug.cgi?id=24292 --- Comment #4 from Marcel de Rooy <m.de.rooy@rijksmuseum.nl> --- (In reply to Katrin Fischer from comment #3)
Could the last comment on bug 14759 be related to this? Also linking them with see also.
Yes, seems to be the same thing. -- You are receiving this mail because: You are the assignee for the bug. You are watching all bug changes.
https://bugs.koha-community.org/bugzilla3/show_bug.cgi?id=24292 Colin Campbell <colin.campbell@ptfs-europe.com> changed: What |Removed |Added ---------------------------------------------------------------------------- CC| |colin.campbell@ptfs-europe. | |com --- Comment #5 from Colin Campbell <colin.campbell@ptfs-europe.com> --- Ubuntu has a newer version of perl than debian Text::Unaccent cant be build on perl after 5.26 (and earlier on many environments). You can confirm this is the problem by installing Text::Unaccent::PurePerl and changing the use Text::Unaccent in Koha::Patron.pm to use that - the errors should then disappear -- You are receiving this mail because: You are the assignee for the bug. You are watching all bug changes.
https://bugs.koha-community.org/bugzilla3/show_bug.cgi?id=24292 Katrin Fischer <katrin.fischer@bsz-bw.de> changed: What |Removed |Added ---------------------------------------------------------------------------- Resolution|--- |DUPLICATE Status|NEW |RESOLVED --- Comment #6 from Katrin Fischer <katrin.fischer@bsz-bw.de> --- (In reply to Marcel de Rooy from comment #4)
(In reply to Katrin Fischer from comment #3)
Could the last comment on bug 14759 be related to this? Also linking them with see also.
Yes, seems to be the same thing.
Marking as duplicate as the ohter has a patch to get rid of the problematic library. *** This bug has been marked as a duplicate of bug 14759 *** -- You are receiving this mail because: You are the assignee for the bug. You are watching all bug changes.
https://bugs.koha-community.org/bugzilla3/show_bug.cgi?id=24292 Rudolf Byker <rudolfbyker@gmail.com> changed: What |Removed |Added ---------------------------------------------------------------------------- CC| |rudolfbyker@gmail.com --- Comment #7 from Rudolf Byker <rudolfbyker@gmail.com> --- I just ran into the same thing today. Is there a way to recover from the failed update? -- You are receiving this mail because: You are watching all bug changes. You are the assignee for the bug.
https://bugs.koha-community.org/bugzilla3/show_bug.cgi?id=24292 --- Comment #8 from Katrin Fischer <katrin.fischer@bsz-bw.de> --- (In reply to Rudolf Byker from comment #7)
I just ran into the same thing today. Is there a way to recover from the failed update?
Hi Rudolf, this has been marked as a duplicate of bug 14759 which has the fix we have been working on. Not sure where your update failed - if it was the dependency check on the web installer you can probably apply the patch and it will work from there as no database update has been run yet. -- You are receiving this mail because: You are watching all bug changes. You are the assignee for the bug.
https://bugs.koha-community.org/bugzilla3/show_bug.cgi?id=24292 --- Comment #9 from Rudolf Byker <rudolfbyker@gmail.com> --- It failed suring "sudo apt upgrade" on a Debian system. That's how I always update Koha (and everything else): Setting up koha-common (19.11.01-1) ... Installing new version of config file /etc/init.d/koha-common ... Installing new version of config file /etc/koha/koha-conf-site.xml.in ... Installing new version of config file /etc/koha/plack.psgi ... Upgrading database schema for rsc Upgrade to 19.06.00.000 done (Wingardium Leviosa!) Upgrade to 19.06.00.001 done (Bug 22960: Fix typo in syspref description) Upgrade to 19.06.00.002 done (Bug 10215: Increase the size of opacnote and librariannote for table subscriptionhistory) Upgrade to 19.06.00.003 done (Bug 22867: UniqueItemFields preference value should be pipe-delimited) Upgrade to 19.06.00.004 done (Bug 22770: Fix typo in language description for el in German) Upgrade to 19.06.00.005 done (Bug 9834: Add the reserves.item_level_hold column) Can't load '/usr/lib/x86_64-linux-gnu/perl5/5.28/auto/Text/Unaccent/Unaccent.so' for module Text::Unaccent: /usr/lib/x86_64-linux-gnu/perl5/5.28/auto/Text/Unaccent/Unaccent.so: undefined symbol: unac_debug_callback at /usr/lib/x86_64-linux-gnu/perl/5.28/DynaLoader.pm line 187. at /usr/share/koha/lib/Koha/Patron.pm line 26. Compilation failed in require at /usr/share/koha/lib/Koha/Patron.pm line 26. BEGIN failed--compilation aborted at /usr/share/koha/lib/Koha/Patron.pm line 26. Compilation failed in require at /usr/share/koha/lib/Koha/Patrons.pm line 30. BEGIN failed--compilation aborted at /usr/share/koha/lib/Koha/Patrons.pm line 30. Compilation failed in require at /usr/share/koha/lib/Koha/Checkouts/ReturnClaim.pm line 27. BEGIN failed--compilation aborted at /usr/share/koha/lib/Koha/Checkouts/ReturnClaim.pm line 27. Compilation failed in require at /usr/share/koha/lib/Koha/Checkouts/ReturnClaims.pm line 26. BEGIN failed--compilation aborted at /usr/share/koha/lib/Koha/Checkouts/ReturnClaims.pm line 26. Compilation failed in require at /usr/share/koha/lib/Koha/Checkout.pm line 27. BEGIN failed--compilation aborted at /usr/share/koha/lib/Koha/Checkout.pm line 27. Compilation failed in require at /usr/share/koha/lib/Koha/Checkouts.pm line 25. BEGIN failed--compilation aborted at /usr/share/koha/lib/Koha/Checkouts.pm line 25. Compilation failed in require at /usr/share/koha/lib/C4/Auth.pm line 37. BEGIN failed--compilation aborted at /usr/share/koha/lib/C4/Auth.pm line 37. Compilation failed in require at /usr/share/koha/lib/C4/Output.pm line 34. BEGIN failed--compilation aborted at /usr/share/koha/lib/C4/Output.pm line 34. Compilation failed in require at /usr/share/koha/lib/Koha/Plugins.pm line 29. BEGIN failed--compilation aborted at /usr/share/koha/lib/Koha/Plugins.pm line 29. Compilation failed in require at /usr/share/koha/intranet/cgi-bin/installer/data/mysql/updatedatabase.pl line 18792. dpkg: error processing package koha-common (--configure): installed koha-common package post-installation script subprocess returned error exit status 2 Processing triggers for man-db (2.8.5-2) ... Processing triggers for systemd (241-7~deb10u2) ... Errors were encountered while processing: koha-common E: Sub-process /usr/bin/dpkg returned an error code (1) So some DB updates have definitely already run. But, I think I figured out how to salvage it. As root: # Install the module cpan Text::Unaccent::PurePerl # Edit the perl source, replacing 'Text::Unaccent' with 'Text::Unaccent::PurePerl' nano /usr/share/koha/lib/Koha/Patron.pm # Reconfigure failed packages dpkg --configure --pending One of the DB updates said: "misc/batchRebuildBiblioTables.pl should be run to populate the fields introduced in bug 11529. It may take some time for larger databases." I'm not sure if this should be run manually, but I tried anyway, without success. My production DB seems to be working again. I hope this helps someone. -- You are receiving this mail because: You are watching all bug changes. You are the assignee for the bug.
https://bugs.koha-community.org/bugzilla3/show_bug.cgi?id=24292 --- Comment #10 from Martin Renvoize <martin.renvoize@ptfs-europe.com> --- I would suggest the best approach is to wait for the release of 19.11.02 in a few days in which this bug is resolved by the removal of the faulty library. Beware, Koha is not yet officially supported on Debian 10 (Which is what I'm guessing you are using here), there are some security issues and other dependancy problems which are not highlighted as obviously as this one. -- You are receiving this mail because: You are watching all bug changes. You are the assignee for the bug.
https://bugs.koha-community.org/bugzilla3/show_bug.cgi?id=24292 --- Comment #11 from Rudolf Byker <rudolfbyker@gmail.com> --- Unfortunately, waiting was not an option. I have an office full of people waiting to catalog new books on Koha :) Is Debian 10 not supported yet? That is what I'm using, yes. -- You are receiving this mail because: You are the assignee for the bug. You are watching all bug changes.
https://bugs.koha-community.org/bugzilla3/show_bug.cgi?id=24292 --- Comment #12 from Martin Renvoize <martin.renvoize@ptfs-europe.com> --- Created attachment 97502 --> https://bugs.koha-community.org/bugzilla3/attachment.cgi?id=97502&action=edit Bug 24296: Update existing data in the database This DB udpate adds the stockration states to the trigger enum in the branchtransfers table and then populates it with any such data currently contained within the comments field. -- You are receiving this mail because: You are watching all bug changes. You are the assignee for the bug.
https://bugs.koha-community.org/bugzilla3/show_bug.cgi?id=24292 --- Comment #13 from Martin Renvoize <martin.renvoize@ptfs-europe.com> --- Created attachment 97503 --> https://bugs.koha-community.org/bugzilla3/attachment.cgi?id=97503&action=edit Bug 24296: Update stockrotation process to use branchtransfers.trigger This patch updates all occurences of stockrotation related lookups of branchtransfers status from using the 'comments' field to using the new 'trigger' field. Test plan: 1) Work through the process of creating a stock rotation plan and adding items to the plan.. no errors should be encoutered during this process. 2) Run the stockrotation cronjob to move some items on.. no errors should be encountered. -- You are receiving this mail because: You are the assignee for the bug. You are watching all bug changes.
https://bugs.koha-community.org/bugzilla3/show_bug.cgi?id=24292 Martin Renvoize <martin.renvoize@ptfs-europe.com> changed: What |Removed |Added ---------------------------------------------------------------------------- Attachment #97502|0 |1 is obsolete| | -- You are receiving this mail because: You are watching all bug changes. You are the assignee for the bug.
https://bugs.koha-community.org/bugzilla3/show_bug.cgi?id=24292 Martin Renvoize <martin.renvoize@ptfs-europe.com> changed: What |Removed |Added ---------------------------------------------------------------------------- Attachment #97503|0 |1 is obsolete| | -- You are receiving this mail because: You are the assignee for the bug. You are watching all bug changes.
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