[Koha-devel] Koha uninstalled by Debian Linux "update"

Weissman, Brian S. Brian.S.Weissman at disney.com
Fri Oct 21 16:18:50 CEST 2011


Jared,

Thanks for the info, but the results appear to be the same without the index line, minus the GPG error. From tracing the dependencies, it looks to me like a bogus requirement somewhere along the way.

koha-koha at WW-R-ITLWDW1K5M:~$ sudo apt-get install libyaz4

The following packages have unmet dependencies:
 libyaz4 : Depends: libgnutls26 (>= 2.12.6.1-0) but 2.8.6-1 is to be installed
E: Broken packages

I looked in /var/lib/dpkg/status and found that libgnutls26 is version 2.8.6-1. Upgrading that tells me that the latest version is installed. This makes me think there is a bad dependency with libyaz4. However, this is the info in the status file for that package:

Package: libyaz4
Status: install ok installed
Priority: extra
Section: libs
Installed-Size: 1768
Maintainer: Vincent Danjean <vdanjean at debian.org>
Architecture: i386
Source: yaz
Version: 4.0.11-1
Replaces: libyaz
Depends: libc6 (>= 2.7), libgnutls26 (>= 2.7.14-0), libicu44 (>= 4.4.1-1), libwrap0 (>= 7.6-4~), libxml2 (>= 2.7.4), libxslt1.1 (>= 1.1.25)
Breaks: idzebra (<= 1.3.4-2), libyaz, php4-yaz (<= 4.1.2-5)
Description: The YAZ Z39.50 toolkit (runtime files)
YAZ is a toolkit that allows you to develop software using the
ANSI Z39.50/ISO23950 standard for information retrieval.
.
This package includes runtime files.
Homepage: http://www.indexdata.dk/yaz/

I am not sure where to go from here.

Thanks,
Bri

Brian Weissman
WDW BT, Technical Specialist
Team Disney North - 303B
Office: 407.828.4751
Brian.S.Weissman at Disney.com<mailto:Brian.S.Weissman at Disney.com>
[cid:image001.png at 01CC8FDA.AE3B8300]

From: Jared Camins-Esakov [mailto:jcamins at cpbibliography.com]
Sent: Friday, October 21, 2011 10:10 AM
To: Weissman, Brian S.
Cc: koha-devel at lists.koha-community.org
Subject: Re: [Koha-devel] Koha uninstalled by Debian Linux "update"

Brian and David,

Please keep these discussions on the list, so that anyone else encountering these issues in the future will be able to find the fix.

It looks to me like your problem is the GPG key for the indexdata repository. The good news is, you don't need the indexdata repository anymore, I don't think. Try removing that line from /etc/apt/sources.list, rerunning apt-get update, and reinstalling koha-common.

Regards,
Jared
On Fri, Oct 21, 2011 at 10:05 AM, Weissman, Brian S. <Brian.S.Weissman at disney.com<mailto:Brian.S.Weissman at disney.com>> wrote:
Here is what I have found so far. It looks like something in the automatic updates told the system to remove koha. This excerpt seems to be the relevant bit from history.log:

Start-Date: 2011-10-20  10:28:54
Install: libidzebra-2.0:i386 (2.0.49-1indexdata, automatic)
Upgrade: libidzebra-2.0-mod-grs-regx:i386 (2.0.44-2, 2.0.49-1indexdata), libidzebra-2.0-dev:i386 (2.0.44-2, 2.0.49-1indexdata), libidzebra-2.0-mod-grs-xml:i386 (2.0.44-2, 2.0.49-1indexdata)
Remove: koha-common:i386 (3.5-1~git+20111017180723.41928b08), libidzebra-2.0-mod-dom:i386 (2.0.44-2), libidzebra-2.0-0:i386 (2.0.44-2), libidzebra-2.0-modules:i386 (2.0.49-1indexdata), libidzebra-2.0-mod-grs-marc:i386 (2.0.44-2), idzebra-2.0:i386 (2.0.44-2), libidzebra-2.0-mod-alvis:i386 (2.0.44-2), idzebra-2.0-utils:i386 (2.0.44-2), libidzebra-2.0-mod-text:i386 (2.0.44-2)
End-Date: 2011-10-20  10:29:03

Start-Date: 2011-10-20  10:29:28
Install: libreadline5:i386 (5.2-7, automatic)
Upgrade: tzdata:i386 (2011k-0squeeze1, 2011l-0squeeze1)
End-Date: 2011-10-20  10:29:32

And this is from the term.log:

Log started: 2011-10-20  10:28:54
Removing koha-common ...
Stopping Zebra server for koha
Removing idzebra-2.0 ...
Removing idzebra-2.0-utils ...
Removing libidzebra-2.0-modules ...
Removing libidzebra-2.0-mod-text ...
Processing triggers for man-db ...
Preparing to replace libidzebra-2.0-mod-grs-xml 2.0.44-2 (using ...
Unpacking replacement libidzebra-2.0-mod-grs-xml ...
Preparing to replace libidzebra-2.0-mod-grs-regx 2.0.44-2 (using ...
Unpacking replacement libidzebra-2.0-mod-grs-regx ...
Removing libidzebra-2.0-mod-grs-marc ...
Removing libidzebra-2.0-mod-dom ...
Removing libidzebra-2.0-mod-alvis ...
Preparing to replace libidzebra-2.0-dev 2.0.44-2 (using ...
Unpacking replacement libidzebra-2.0-dev ...
Processing triggers for man-db ...
Removing libidzebra-2.0-0 ...
Selecting previously deselected package libidzebra-2.0.
Unpacking libidzebra-2.0 (from ...
Setting up libidzebra-2.0 (2.0.49-1indexdata) ...
Setting up libidzebra-2.0-mod-grs-xml (2.0.49-1indexdata) ...
Setting up libidzebra-2.0-mod-grs-regx (2.0.49-1indexdata) ...
Setting up libidzebra-2.0-dev (2.0.49-1indexdata) ...
Log ended: 2011-10-20  10:29:03

Log started: 2011-10-20  10:29:28
Preparing to replace tzdata 2011k-0squeeze1 (using ...
Unpacking replacement tzdata ...
Setting up tzdata (2011l-0squeeze1) ...

Current default time zone: 'America/New_York'
Local time is now:      Thu Oct 20 10:29:30 EDT 2011.
Universal Time is now:  Thu Oct 20 14:29:30 UTC 2011.
Run 'dpkg-reconfigure tzdata' if you wish to change it.

Selecting previously deselected package libreadline5.
Unpacking libreadline5 (from ...
Setting up libreadline5 (5.2-7) ...
Log ended: 2011-10-20  10:29:32

I have since tried to reinstall koha and followed a string of dependencies and had no success. Here is the chain with the errors. Let me know if you want more details.

koha-koha at WW-R-ITLWDW1K5M:~$ sudo apt-get update
 (list of gets deleted for space)
Fetched 11.6 MB in 10s (1,091 kB/s)
Reading package lists... Done
W: GPG error: http://ftp.indexdata.dk wheezy Release: The following signatures w ere invalid: KEYEXPIRED 1319102732 KEYEXPIRED 1319102732 KEYEXPIRED 1319102732


koha-koha at WW-R-ITLWDW1K5M:~$ sudo apt-get install koha

The following packages have unmet dependencies:
koha : Depends: koha-common but it is not going to be installed
E: Broken packages

koha-koha at WW-R-ITLWDW1K5M:~$ sudo apt-get install koha-common

The following packages have unmet dependencies:
 koha-common : Depends: idzebra-2.0 but it is not going to be installed
E: Broken packages

koha-koha at WW-R-ITLWDW1K5M:~$ sudo apt-get install idzebra-2.0

The following packages have unmet dependencies:
 idzebra-2.0 : Depends: idzebra-2.0-utils (= 2.0.49-1indexdata) but it is not going to be installed
              Depends: libidzebra-2.0-modules but it is not going to be installed
E: Broken packages

koha-koha at WW-R-ITLWDW1K5M:~$ sudo apt-get install idzebra-2.0-utils

The following packages have unmet dependencies:
 idzebra-2.0-utils : Depends: libyaz4 (>= 4.2.10) but 4.0.11-1 is to be installed
E: Broken packages

koha-koha at WW-R-ITLWDW1K5M:~$ sudo apt-get install libidzebra-2.0-modules

The following packages have unmet dependencies:
 libidzebra-2.0-modules : Depends: libidzebra-2.0-mod-alvis but it is not going to be installed
                         Depends: libidzebra-2.0-mod-dom but it is not going to be installed
                         Depends: libidzebra-2.0-mod-grs-marc but it is not going to be installed
                         Depends: libidzebra-2.0-mod-text but it is not going to be installed
E: Broken packages

koha-koha at WW-R-ITLWDW1K5M:~$ sudo apt-get install libyaz4

The following packages have unmet dependencies:
 libyaz4 : Depends: libgnutls26 (>= 2.12.6.1-0) but 2.8.6-1 is to be installed
E: Broken packages

koha-koha at WW-R-ITLWDW1K5M:~$ sudo apt-get install libgnutls26

libgnutls26 is already the newest version.
0 upgraded, 0 newly installed, 0 to remove and 2 not upgraded.

koha-koha at WW-R-ITLWDW1K5M:~$ sudo apt-get upgrade libgnutls26
Reading package lists... Done
Building dependency tree
Reading state information... Done
The following packages have been kept back:
 libyaz4 yaz
0 upgraded, 0 newly installed, 0 to remove and 2 not upgraded.

That is where I dead end.


Brian Weissman
WDW BT, Technical Specialist
Team Disney North - 303B
Office: 407.828.4751<tel:407.828.4751>
Brian.S.Weissman at Disney.com<mailto:Brian.S.Weissman at Disney.com>



-----Original Message-----
From: Hartman, David W. - GBTS Library
Sent: Thursday, October 20, 2011 6:18 PM
To: Robin Sheat
Cc: Weissman, Brian S.
Subject: Re: [Koha-devel] Koha uninstalled by Debian Linux "update"
Yes, we'll report what we can and thanks for your help!

Sent from my iPhone! Pardon typos, etc.


On Oct 20, 2011, at 6:12 PM, "Robin Sheat" <robin at catalyst.net.nz<mailto:robin at catalyst.net.nz>> wrote:

> Hartman, David W. - GBTS Library schreef op do 20-10-2011 om 11:44
> [-0400]:
>> Just a heads up that a recent “update” by Debian Linux removed the
>> application Koha – my apache and data files apparently are fine.
>>
>> How do I reinstall Koha without damaging or overwriting my data?   If
>> anyone has any experience with this, please let me know.
>>
> Just reinstall the koha-common package. Grab a backup if you want to be
> safe, but I'd expect it would be fine. If everything in /etc/ is
> untouched (which I'd expect) then it should just magically work again.
>
>> If you see the red “burst” in the upper right hand corner, only do the
>> safe install .. or else…
>
> Are you able to provide me with more information? Perhaps the logs
> in /var/log/apt or so. I'd like to see what was going on there.
>
> Robin.
> <signature.asc>
> _______________________________________________
> Koha-devel mailing list
> Koha-devel at lists.koha-community.org<mailto:Koha-devel at lists.koha-community.org>
> http://lists.koha-community.org/cgi-bin/mailman/listinfo/koha-devel
> website : http://www.koha-community.org/
> git : http://git.koha-community.org/
> bugs : http://bugs.koha-community.org/



--
Jared Camins-Esakov
Bibliographer, C & P Bibliography Services, LLC
(phone) +1 (917) 727-3445
(e-mail) jcamins at cpbibliography.com<mailto:jcamins at cpbibliography.com>
(web) http://www.cpbibliography.com/

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